Topology and Geometry of Biopolymers
About this Title
Erica Flapan, Pomona College, Claremont, CA and Helen Wong, Claremont McKenna College, Claremont, CA, Editors
Publication: Contemporary Mathematics
Publication Year:
2020; Volume 746
ISBNs: 978-1-4704-4840-0 (print); 978-1-4704-5456-2 (online)
DOI: https://doi.org/10.1090/conm/746
Table of Contents
Front/Back Matter
The topology and geometry of DNA
- Jonathan M. Fogg and Lynn Zechiedrich – Beyond the static DNA model of Watson and Crick
- P. Liu, R. Polischuk, Y. Diao and J. Arsuaga – Characterizing the topology of kinetoplast DNA using random knotting
- Alex Kasman and Brenton LeMesurier – Did sequence dependent geometry influence the evolutionof the genetic code?
- Tetsuo Deguchi and Erica Uehara – Topological sum rules in the knotting probabilities of DNA
- Dorothy Buck and Danielle O’Donnol – Knotting of replication intermediates is narrowly restricted
- Allison H. Moore and Mariel Vazquez – Recent advances on the non-coherent band surgery model for site-specific recombination
The topology and geometry of proteins
- Sophie E. Jackson – Why are there knots in proteins?
- Ana Nunes and Patrícia F. N. Faísca – Knotted proteins: Tie etiquette in structural biology
- Dimos Goundaroulis, Julien Dorier and Andrzej Stasiak – Knotoids and protein structure
- Kenneth C. Millett – Topological linking and entanglement in proteins
- Eleni Panagiotou and Kevin W. Plaxco – A topological study of protein folding kinetics